VECTOR STOCKS: in -80 archive freezer
NAME FROM DATE DILUTED IN USED FOR #TUBES CAME FROM MORE INFO
VECTOR STOCK BOX 1
C115 Rae1D TJ 05/11/05 1
gagpol TJ 01/31/08 1.87ug/ul 1
MCMV-Thy1.1-OVA TJ 08/31/07 0.33ug/ul 1
MCSV-CMV Rae1E GFP TJ 02/29/04 0.70ug/ul 1 clone 1
MCSV-D Rae1B-GMCSF TJ 09/10/05 0.50ug/ul 1 clone 7
MCV CMV Rae1E TJ 03/03/07 1.10ug/ul 1
MFG Rae1 B TJ 01/31/08 1.10ug/ul 1
MFG Vector TJ 01/31/08 1.18ug/ul 1
MFG-H60 TJ 01/31/08 1.22ug/ul 1
MFG-Rae1D TJ 09/02/05 0.80ug/ul 1
MSCV 2.2 TJ 10/06/04 1.30ug/ul 1
MSCV CMV D GFP TJ 03/03/04 0.90ug/ul 1
MSCV Thy1.1 TJ 08/31/07 1.25ug/ul 1
MSCV Thy1.1 SML 09/28/07 H2O miniprep DNA 1 Sha Lab
MSCV Thy1.1 OVA SML 09/28/07 miniprep DNA 1
MSCV2.2-Rae1E TJ 01/31/08 1.00ug/ul 1
MSCV22-Rae1E  TJ 03/12/05 4.10ug/ul 1
MSCV-CMV-GFP TJ 03/03/04 0.75ug/ul 1
MSCV-CMV-Rae1D IRES GMCSF TJ 07/06/05 1.30ug/ul 1
MSCV-CMV-Rae1E IRES GMCSF TJ 03/08/05 0.90ug/ul 1
MSCV-CMV-RaeD TJ 05/18/05 1.10ug/ul 1
MSCVD Rae1B GMCSF TJ 09/10/05 0.55ug/ul 1 clone 13
MSCV-D Rae1D TJ 07/25/05 0.84ug/ul 1
MSCV-H60 TJ 07/13/06 0.72ug/ul 1 clone 3
MSCV-H60 TJ 07/13/06 0.57ug/ul 1 clone 5
PACXIX-Rae1D TJ 09/12/05 0.40ug/ul 1 clone 20
pBluescript OVA SML 09/28/07 to make MSCV-Thy1.1 OVA 1 Shastri Lab
pBs - IRES TJ 01/10/04 0.73ug/ul 1 (meth-)
pBs IRES-GMCSF-Adaptor TJ 05/21/05 0.97ug/ul 1
pBs-IRES  TJ 01/31/08 2.00ug/ul 1
pcDNA OVA SML 09/28/07 PBS to make MSCV-Thy1.1 OVA 1 Shastri Lab
pCMK gagpd TJ/DS 01/31/08 3.347ug/ul 1
Pellet Paint Co-Precipitant TJ 01/31/08 125ug/ul 1 Novagen
pGEM-GMCSF TJ 07/01/03 2.00ug/ul 1 pGEM T Easy GMCSF
pGEMT-FMCSF TJ 01/10/04 0.60ug/ul 1 (meth-)
pHCMV-11 VSV TJ 01/31/08 1.78ug/ul 1
pHSCV H60 TJ 01/31/08 1.10ug/ul 1 A1
PKS - SML 09/28/07 1 Invitrogen
pMFG-GMCSF TJ 01/31/08 1.00ug/ul 1
pMFG-Mike TJ 01/31/08 0.5ug/ul 1
pMG-GMCSF Ly+2 TJ 01/31/08 1
pMG-GMCSF Ly+2 TJ 01/31/08 0.90ug/ul 1
pMSCV - MULT TJ 08/08/04 1.00ug/ul 1 clone 12
pMSCV CMV GFP TJ 01/31/08 1.10ug/ul 1
pMSCV D MULT TJ 08/08/04 1.00ug/ul 1 clone 1
pMX GFP TJ 01/31/08 0.50ug/ul 1
pQC-XIP-Rae1D TJ 08/29/05 0.40ug/ul 1
PQC-XIX TJ 08/31/05 0.40ug/ul 1
VpR FD 11/15/08 31
VpR FD 11/16/08 2
VECTOR STOCK BOX 2
NAME FROM DATE DILUTED IN USED FOR #TUBES CAME FROM MORE INFO
1C181-BAC DNA FD 06/04 1
HIV HAS+ VA- E- VpR FD 1
HIV HS+ VpR+ E- FD 1
NL43 VpR- FD 03/03/08 1
NL43 VpR+ FD 03/03/08 1
P161-GFP FD 06/22/07 1 mg/ml 1
P161-GFP FD 1.5 ug/10ul TE 1
PCVSVg FD 0.5 mg/ml 1
PDR9 FD 1.3 ug/10ul TE 1
PEGFP-C1 FD 11/05/05 1 ug/ml 1
PG 1 FD 06/22/07 1 ug/ml 1
PHR-VpR FD 06/22/07 1 mg/ml 1
PHR-VPRIRES FD 1.78 ug/10ul TE 1
PVSV-G FD 02/10/05 1 ug/ml 1
PVSV-G FD 2.7 ug/10ul TE 1
VpR FD 11/16/08 22
VSVG FD 03/03/08 1
pSpax2 MW 1.6 transduction pFG12 1 Schlissel lab
pFG12 HIF-1a 3mutations MW 1 inducible hif-1a 1
pcDNA3 HIF-1a dPA MW 1.3 1
pVEGF-Luc MW 1.54 HRE 1 Winoto lab
pGL3-PF1-ER3 #4 MW 0.0995 h60c promoter luciferase 1
pGL3-PF1-ER3 #2 MW 0.744 h60c promoter luciferase 1
pGL3-PF1-ER3 #3 MW 0.21 h60c promoter luciferase 1
pcDNA3 HIF-1a 3mutation MW 1.16 inducible hif-1a 1
pGL3-PF1-ER3 #5 MW 0.14 h60c promoter luciferase 1
pFG12 HIF-2a dPA MW 1.56 inducible hif-2a 1
pFG12-TRE-UbC-rtTA-Thy1.1 MW 2 dox inducible vector 1 Schlissel lab
pFG12 HIF-1a dPA MW 0.22 inducible hif-1a 1
pcDNA3 HIF-2a dPA MW 0.23 1
pGL3-PF1-ER5 #8 MW 0.119 h60c promoter luciferase 1
pcDNA3-CD4 MW 2.1 may be human CD4, not sure 1 Coscoy lab
pGL3 control vector MW 0.6 firefly luciferase 1
pGL3 basic vector MW 0.8 firefly luciferase 1
pGL3 promoter vector MW 1.1 firefly luciferase 1
pGL3-PF1-ER5 #2 MW 1.2 h60c promoter luciferase 1
pGL3-PF1-ER5 Reverse MW 0.77 h60c promoter luciferase 1
pEFRL MW 1.4 renilla luciferase 1 Winoto lab
pCI MW 2 mammalian expression vector Winoto lab
pGL3 enhancer vector MW 0.12 firefly luciferase 1
pGL3-PF1-ER5 #1 MW h60c promoter luciferase 1
pGL3-PF1-ER5 #5 MW 0.529 h60c promoter luciferase 1
pSport6-YY1 MW 0.54 YY1 1
pMSCV-HIF-1a-dPA-GFP MW 0.16 HIF-1a dPA 1
pMSCV-HIF-1a-dPA-Thy1.1 MW 1.3 HIF-1a dPA 1
pMSCV-H60A1-GFP MW 1.1 also known as H60c 1
pMSCV-H60A1-GFP MW 0.5 also known as H60c 1
pMSCV-H60A1 delta GFP MW 2.1 also known as H60c 1
pMSCV-Rae1e-GFP MW 0.7 1
pMSCV-CD8-FLAG-MULT1-GFP MW 0.183 CD8 leader sequence followed by FLAG epitope followed by MULT1 1
pcDNA4-myc-his-H60A1-Ig 6X MW 1.5 H60c-Fc with 6 His 1
pCI-H60A1 w/ H60 leader MW 1.8 H60c expressed with H60a leader sequence 1
pCI-H60 MW 0.942 1
pMSCV-H60A1 w/ CD8 leader MW 0.361 H60c expressed with CD8 leader 1
pcDNA4-Mult1-Ig MW 0.75 Mult1-Fc 1
pBS II KS+ MW 1.5 1
pMSCV-H60A1 w/ CD8 leader MW 0.523 H60c expressed with CD8 leader 1
pCI-GFP MW 2.2 1
pCI-H60A1 MW 0.68 H60c in pCI expression vector 1
VECTOR STOCK BOX 3
NAME FROM DATE DILUTION USED FOR #TUBES CAME FROM MORE INFO
pcDNA4-myc-his-B/cL H60A1-Ig 0.5 H60c-Fc fused to H60a leader 1
H60A1ch CD8FLAG 1.7 CD8FLAG leader fused to leaderless H60A1 1
H60A1ch CD8FLAG 1.8 CD8FLAG leader fused to leaderless H60A1 1
H60B/c chim pCI 0.5 H60B/c leader fused to leaderless H60c 1
pMSCV-IG CD8FLAG H60A1 0.116 CD8FLAG leader fused to leaderless h60A1 1
pMSCV-IG CD8FLAG H60A1 0.325 CD8FLAG leader fused to leaderless h60A1 1
pMSCV-IRES GFP Emp2 0.11 ug/ul 1
pMSCV-IRES GFP YY1 0.120 ug/ul
pcDNA4-Rae1-Ig 1.34 ug/ul
pcDNA4-H60-Ig
pcDNA4-H60A1-Ig 4.2 ug/ul
pMSCV-CMVpro-IRES-GFP CD8-FLAG-Mult1 (pMCIG-CFM) Tim Nice 03/08/10 1.25 mg/ml Retroviral transduction of WT Mult1encodes CD8 leader FLAG Mult1 1
pMCIG-CFM D239 Tim Nice 03/08/10 0.8 mg/ml Retroviral transduction of Mult1 lacking its entire cytoplasmic domain 1
pMCIG-CFM D244 Tim Nice 03/08/10 0.3 mg/ml 1
pMCIG-CFM D253 Tim Nice 03/08/10 0.7 mg/ml 1
pMCIG-CFM D253 P248A Tim Nice 03/08/10 1 mg/ml 1
pMCIG-CFM D253 S247A Tim Nice 03/08/10 0.8 mg/ml 1
pMCIG-CFM D253 S247D Tim Nice 03/08/10 1.1 mg/ml 1
pMCIG-CFM D253 KK240RR Tim Nice 03/08/10 1.6 mg/ml 1
pMCIG-CFM D298 Tim Nice 03/08/10 1 mg/ml 1
pMCIG-CFM KK240RR Tim Nice 03/08/10 1.3 mg/ml 1
pMCIG-CFM KK240RR, KLK278RLR Tim Nice 03/08/10 0.7 mg/ml 1
pMCIG-CFM KK240RR, KLK278RLR, KK310RR Tim Nice 03/08/10 1.3 mg/ml Retroviral transduction of lysine-less (stable) Mult1 1
pMCIG-CFM SS246AA Tim Nice 03/08/10 0.75 mg/ml 1
pMCIG-H60a Tim Nice 03/08/10 0.8 mg/ml Retroviral transduction of H60a 1
pMCIG-H60a(ec+tm)-Mult1(ic) Tim Nice 03/08/10 0.15 mg/ml Retroviral transduction of H60a-Mult1 (HMIC) 1
pMCIG-H60a(ec)-Mult1(tm+ic) Tim Nice 03/08/10 0.81 mg/ml Retroviral transduction of H60a-Mult1 (HMTM) 1
pMCIG-NNL Tim Nice 03/08/10 1.8 mg/ml Unknown gene with similarity to NKG2D ligands (NCBI accession: AK136660) cloned from B6 skin cDNA 1
pMCIG-1D*2A Tim Nice 03/08/10 0.75 mg/ml poliovirus gene 2A cleaves eIF4G inhibiting cap-dependent translation 1
pMCIG-CFM-HA Tim Nice 03/08/10 1 mg/ml CFM with c-terminal HA tag 1
pMCIG-CD8-HA-Mult1 Tim Nice 03/08/10 0.5 mg/ml CD8 leader-HA tag-WT Mult1 1
pMCIG-HuR Tim Nice 03/08/10 1.5 mg/ml HuR is an RNA binding protein regulating stability 1
pMCIG-RPL26 Tim Nice 03/08/10 1.5 mg/ml RPL26 is a ribosomal protein shown to regulate translation of p53 1
pMSCV-IRES-Thy1.1 (pMIT) MYC-MARCH4 Tim Nice 03/08/10 1.9 mg/ml Retroviral transduction of MARCH4 1
pMIT-MYC-MARCH9 Tim Nice 03/08/10 1.9 mg/ml Retroviral transduction of MARCH9 1
pMIT-CD8-FLAG-Mult1-GFP Tim Nice 03/08/10 2 mg/ml CFM with a c-terminal GFP fusion (GFP may be cleaved off to some extent) 1
pMSCV-IRES-hCD4 (pMI4) Tim Nice 03/08/10 1.5 mg/ml 1
pMI4-BiP Tim Nice 03/08/10 2.2 mg/ml ER resident chaperone BiP (GRP78) 1
pMI4-BiP T37G Tim Nice 03/08/10 0.6 mg/ml catalytically inactive BiP 1
pCMV-TAG3a (pCT3a) Tim Nice 03/08/10 1.2 mg/ml expression vector for N-terminal MYC tagging 1
pCT3a-PHAS1 5A Tim Nice 03/08/10 1.3 mg/ml PHAS-1 is another name for 4EBP, 5A mutation stabilizes 4EBP (PHAS-1) 1 John C. Lawrence Jr. lab (UVA)
pCT3a-PHAS1 F113A Tim Nice 03/08/10 1.2 mg/ml F113A stabilizes 4EBP (PHAS-1) 1 John C. Lawrence Jr. lab (UVA)
pCT3a-COP1 Tim Nice 03/08/10 0.3 mg/ml encodes the COP1 E3 ubiquitin ligase 1
pCDNA-WT Dynamin Tim Nice 03/08/10 0.3 mg/ml 1 Coscoy lab
pCDNA-DN Dynamin Tim Nice 03/08/10 1 mg/ml 1 Coscoy lab
pCDNA3.1-tdTomato Tim Nice 03/08/10 0.8 mg/ml 1 Schlissel lab
pR/DE/F Tim Nice 03/08/10 1.3 mg/ml Bi-cistronic dual luciferase to test for IRES activity, (Renilla luciferase-STOP codon-deadEMCV IRES-Firefly luciferase) Clone 5' UTR into EcoRI and NcoI sites, triple ligation required 1 Sarnow lab (STANFORD)
pR/DE/F-247bp Mult1 5'UTR for. Tim Nice 03/08/10 1.5 mg/ml 1
pR/DE/F-247bp Mult1 5'UTR rev Tim Nice 03/08/10 0.9 mg/ml 1
pR/DE/F-298bp Mult1 5'UTR for. Tim Nice 03/08/10 2.4 mg/ml 1
pR/DE/F-298bp Mult1 5'UTR rev Tim Nice 03/08/10 1.5 mg/ml 1
pR/DE/F-600bp Mult1 5'UTR Tim Nice 03/08/10 1 mg/ml 1
pR/DE/F-EMCV IRES Tim Nice 03/08/10 1.6 mg/ml 1
pGL3-247bp Mult1 5'UTR Tim Nice 03/08/10 1.2 mg/ml pGL3 control plasmid with Mult1 UTR cloned adjacent to luciferase 1
pGL3-298bp Mult1 5'UTR Tim Nice 03/08/10 0.5 mg/ml pGL3 control plasmid with Mult1 UTR cloned adjacent to luciferase 1
pGL3-Mult1 3'UTR Tim Nice 03/08/10 0.5 mg/ml pGL3 control plasmid with Mult1 UTR cloned adjacent to luciferase 1
pGL3-298bp Mult1 5'UTR + Mult1 3'UTR Tim Nice 03/08/10 2 mg/ml pGL3 control plasmid with Mult1 UTR cloned adjacent to luciferase 1
pGL3-Mult1 3'UTR D1 Tim Nice 03/08/10 1 mg/ml first 1kb of Mult1 3'UTR 1
pGL3-Mult1 3'UTR D2 Tim Nice 03/08/10 1.2 mg/ml middle 0.5kb of Mult1 3'UTR 1
pGL3-Mult1 3'UTR D3 Tim Nice 03/08/10 1.2 mg/ml last 0.5kb of Mult1 3'UTR 1
pGL3-Mult1 3'UTR D12 Tim Nice 03/08/10 1.1 mg/ml first 1.5kb of Mult1 3'UTR (D1 and D2 combined) 1
pGL3-Mult1 3'UTR D23 Tim Nice 03/08/10 1 mg/ml last 1.5kb of Mult1 3'UTR (D2 and D3 combined) 1
pCGN-HA-hMARCH1 Tim Nice 03/08/10 1.1 mg/ml 1 Coscoy lab
pCGN-HA-hMARCH2 Tim Nice 03/08/10 0.5 mg/ml 1 Coscoy lab
pCGN-HA-hMARCH3 Tim Nice 03/08/10 1 mg/ml 1 Coscoy lab
pCGN-HA-hMARCH4 Tim Nice 03/08/10 1.2 mg/ml 1 Coscoy lab
pCGN-HA-hMARCH8 Tim Nice 03/08/10 1.1 mg/ml 1 Coscoy lab
pCGN-HA-hMARCH9 Tim Nice 03/08/10 1 mg/ml 1 Coscoy lab
pLMP Tim Nice 03/08/10 2 mg/ml 1 Barton lab (via open biosystems)
pCDNA3.1-GFP Manali 03/08/10 0.6 and 1 mg/ml pCDNA3.1 with GFP replacing Neomycin selection gene (XmaI and BstBI sites) pCDNA3.1 with GFP replacing Neomycin selection gene (XmaI and BstBI sites)
pCDNA3.1-GFP Mult1 Manali 03/08/10 0.5 mg/ml Mult1 cloned into AflII and NotI sites 2
pCDNA3.1-GFP Mult1+Mult1 3' UTR Manali 03/08/10 0.7 and 0.2 mg/ml Mult1 3' UTR cloned into NotI and XhoI sites 2
pCDNA3.1-GFP Mult1+GYK 3' UTR Manali 03/08/10 0.3 and ? mg/ml GYK 3'UTR cloned into NotI and XhoI sites 2
pSicoR mDICER shRNA Tim (via Nataliya) 03/28/10 0.35 mg/ml DICER knockdown 1 ?
VECTOR STOCK BOX 4
NAME FROM DATE DILUTION USED FOR #TUBES CAME FROM MORE INFO
MSCV-pm Cancer 1000 Tim Nice 03/28/10 2.9 mg/ml shRNA screen 1 S. Elledge
MSCV-pm Human Kinase array I Tim Nice 03/28/10 2.1 mg/ml shRNA screen 1 S. Elledge
MSCV-pm Human Kinase array II Tim Nice 03/28/10 1.8 mg/ml shRNA screen 1 S. Elledge
MSCV-pm Human Ub array I Tim Nice 03/28/10 2.3 mg/ml shRNA screen 1 S. Elledge
MSCV-pm Human UB array II Tim Nice 03/28/10 1.8 mg/ml shRNA screen 1 S. Elledge
pPGK-Hyg Sang-Ho 11/20/06 Marker Cassette Dr. Sohn (Winoto Lab) hygromycin resistance gene cassette containing plasmid, positive selection marker for Tg mouse
pBS-SK Sang-Ho cloning vector Lily Zhang parental vector for Vg gene KO and targeting
pTKNeoLoxP 5' arm 3' arm Sang-Ho 11/20/06 Knock in Lily Zhang basal structure of Knock in construct for Vγ4 Vγ3 bearing upstream of L4 and downstream of V3
pKSTKneoLoxP Sang-Ho 11/21/06 Marker Cassette Lily Zhang Backbone of pTKNeoLoxP 5' arm 3' arm
PGKneoF2L2DTA Sang-Ho 11/21/06 Marker Cassette Dr. Phil Soriano diphtheria toxin A (DTA) for negative selection marker, not need any drug for the selection, for RMCE
pCre/FLPe Sang-Ho 04/10/08 recombinase Dr. Matthias Lauth NLS-Cre and NLS-Flpe recombinase expression plasmid for Recombinase mediated cassette exchange (RMCE)
pFLPe Sang-Ho 06/25/08 recombinase made from pCre/FLPe by deleting Cre gene (PstI-BamHI fragment)
pMC-Cre Sang-Ho 04/10/08 recombinase Lily Zhang
pTKLoxPNeo FrtHyg 5' arm 3' arm Sang-Ho 01/11/07 Knock in Final construct for Knock-in for pL4 pL3 KO
pBS L4V4 Sang-Ho 11/21/06 unarranged mouse genome Lily Zhang intermedate construct
pBS L4V4 L3V3 Sang-Ho 11/21/06 unarranged mouse genome Lily Zhang Initial clone of Vγ4 Vγ3 from BAC to pBS for subcloning
pBS V4V3 no arm Sang-Ho 11/21/06 unarranged mouse genome Lily Zhang intermediate construct, Lack of 5' arm and 3' arm from pBS L4V4 L3V3
pBS Vγ2 Sang-Ho 11/21/06 unarranged mouse genome Lily Zhang intermedate construct