Last Updated 2012-03-30

Dehnert KW, Baskin JM, Laughlin ST, Beahm BJ, Naidu NN, Amacher SL, Bertozzi CR. Imaging the sialome during zebrafish development with copper-free click chemistry. Chembiochem. 2012 Feb 13; 13(3):353-7. doi: 10.1002/cbic.201100649. Epub 2012 Jan 20. PubMed PMID: 22262667.

Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG. Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions. Dev Biol. 2011 Nov 15; 359(2):251-61. doi: 10.1016/j.ydbio.2011.08.025. Epub 2011 Sep 7. PubMed PMID: 21925157.

McCammon JM, Doyon Y, Amacher SL. Inducing high rates of targeted mutagenesis in zebrafish using zinc finger nucleases (ZFNs). Methods Mol Biol. 2011; 770:505-27. PubMed PMID: 21805278.

Dehnert KW, Beahm BJ, Huynh TT, Baskin JM, Laughlin ST, Wang W, Wu P, Amacher SL, Bertozzi CR. Metabolic labeling of fucosylated glycans in developing zebrafish. ACS Chem Biol. 2011 Jun 17; 6(6):547-52. Epub 2011 Apr 5. PubMed PMID: 21425872; PubMed Central PMCID: PMC3117394.

McCammon JM, Amacher SL. Using zinc finger nucleases for efficient and heritable gene disruption in zebrafish. Methods Mol Biol. 2010; 649:281-98. PubMed PMID: 20680842.

Baskin JM, Dehnert KW, Laughlin ST, Amacher SL, Bertozzi CR. Visualizing enveloping layer glycans during zebrafish early embryogenesis. Proc Natl Acad Sci U S A. 2010 Jun 8; 107(23):10360-5. Epub 2010 May 20. PubMed PMID: 20489181; PubMed Central PMCID: PMC2890823.

Garnett AT, Han TM, Gilchrist MJ, Smith JC, Eisen MB, Wardle FC, Amacher SL. Identification of direct T-box target genes in the developing zebrafish mesoderm. Development. 2009 Mar; 136(5):749-60. Epub 2009 Jan 21. PubMed PMID: 19158186; PubMed Central PMCID: PMC2685943.

Amacher SL. Emerging gene knockout technology in zebrafish: zinc-finger nucleases. Brief Funct Genomic Proteomic. 2008 Nov; 7(6):460-4. PubMed PMID: 19109309; PubMed Central PMCID: PMC2722258.

Doyon Y*, McCammon JM*, Miller JC, Faraji F, Ngo C, Katibah G, Amora R., Hocking TD, Zhang L, Rebar EJ, Gregory PD, Urnov FD, and Amacher SL. Heritable targeted gene disruption in zebrafish using designed zinc finger nucleases. Nature Biotechnology. 2008; 26, 702-708. (* Equal contributions).

Laughlin ST*, Baskin JM*, Amacher SL, and Bertozzi CR. In vivo imaging of membrane-associated glycans in a developing vertebrate. Science. 2008; 320, 664-667. (* Equal contributions).

Ouyang M, Garnett AT, Han TM, Hama K, Lee A, Deng Y, Lee N, Liu H-Y, Amacher SL, Farber SA, and Ho S-Y. A web based resource characterizing the zebrafish developmental profile of over 16,000 transcripts. Gene Expression Patterns. 2007; 8, 171-180.

Daggett DF, Domingo CR, Currie PD, and Amacher SL. Control of morphogenetic cell movements in the early zebrafish myotome. Dev Biol. 2007; 309, 169-179.

Henry CA, McNulty IM, Durst WA, Munchel SE, and Amacher SL. Interactions between muscle fibers and segment boundaries in zebrafish. Dev Biol. 2005; 287, 346-350.

Dill KK and Amacher SL. tortuga refines Notch pathway gene expression in the zebrafish presomitic mesoderm at the post-transcriptional level. Dev Biol. 2005; 287, 225-236.

Henry CA and Amacher SL. Zebrafish slow muscle cell migration induces a wave of fast muscle morphogenesis. Dev Cell. 2004; 7, 917-923.

Daggett DF, Boyd CA, Gautier P, Bryson-Richardson RJ, Thisse C, Thisse B, Amacher SL, and Currie PD. Developmentally restricted actin regulatory molecules control morphogenetic cell movements in the zebrafish gastrula. Curr Biol. 2004; 14, 1632-1638.

Henry CA, Urban MK, Dill KK, Merlie JP, Page MF, Kimmel CB, and Amacher SL. Two linked hairy/enhancer-of-split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries. Development. 2002; 129, 3693-3704.

Amacher SL, Draper BD, Summers BR, and Kimmel CB. The zebrafish T-box genes no tail and spadetail are required for development of trunk and tail mesoderm and medial floor plate. Development. 2002; 129, 3311-3323.